Category: Tech Notes

Reuse Code with one click!

Emily So
November 19, 2021

Duplicating Compute Capsules in Code Ocean In bioinformatics and computational biology, solid workflows are difficult to set up. Advanced analyses often require several computational environments, different languages and multiple libraries.

Compute Capsule, Duplicate, Reuse, Tooling, Workbench

RStudio and Code Ocean – Better Together

Ben Xu
September 7, 2021

Creating an Essential Research Collaboration Environment with R Studio Today’s high-throughput biomedical research techniques and intensive interdisciplinary collaborations – especially between biologists and computational researchers – require tools and infrastructure

Collaboration, R, RStudio, Tooling

One Experience for Sharing, Two Ways to Deliver Interactive Analysis

Ben Xu
September 6, 2021

Code Ocean App Panels and Shiny Apps The interdisciplinary nature of computational biology demands rapid, reliable sharing of analyses to enable collaborative, reproducible research between individuals and teams. Increasingly, conventional

App Panel, R, RStudio, Shiny, Tooling

Making Jupyter Notebooks a Research Collaboration Environment

Emily So
September 3, 2021

Jupyter Notebooks have become exceedingly popular in computational biology because of their ability to combine code, images and text into a single document. Adding detailed as well as easy to

Collaboration, IDE, Juypter, Notebooks, Tooling

Category: Tech Notes

Reuse Code with one click!

RStudio and Code Ocean – Better Together

One Experience for Sharing, Two Ways to Deliver Interactive Analysis

Making Jupyter Notebooks a Research Collaboration Environment

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