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Webinar: watch on demand

Introducing nf-core pipelines on Code Ocean

nf-core pipelines are considered best practice for many types of bioinformatics analyses. However, installing, configuring, and finally running these pipelines are usually time consuming and require certain expertise.

Now you can easily access these open source best practice pipelines in Code Ocean with zero installation and configuration. You choose the pipeline, Code Ocean installs, and you click to run. 

Watch this live demo to: 

Unlock the power of nf-core pipelines:

  • Take advantage of 93 fully featured pipelines currently available as part of nf-core
  • Seamlessly integrate nf-core pipelines into your workflow with zero effort. Say goodbye to installation headaches, configuration complexities, and troubleshooting woes.
  • Each pipeline offers a plethora of parameter options, ensuring flexibility and adaptability to your unique research needs.

Introducing a no-code UI for effortless pipeline customization:

  • Easily parameterize pipeline runs, whether you’re a coding aficionado or a newcomer to bioinformatics, all within a simple, intuitive environment.

Simplify your bioinformatics journey:

  • Bid farewell to the days of grappling with command line and deciphering complex scripts. 
  • With Code Ocean’s App Panel, effortlessly harness the full potential of nf-core pipelines.

Who should watch this session?

This on-demand webinar is tailored for computational scientists and biologists eager to streamline their bioinformatics analyses. Whether you’re a seasoned Nextflow user or entirely new to nf-core pipelines, this session promises invaluable insights to enhance your research endeavors.

 

Speakers

Alicia Liu

Product Manager

Alicia Liu

Product Manager

Alicia Liu

Alicia is a Product Manager at Code Ocean. She received her Ph.D. in molecular and cell biology, and conducted research in the area of epigenetics and genomic imprinting. Before joining Code Ocean, she supported biopharma and biotech customers with their NGS projects at Azenta Life Sciences.

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